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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898654.1_cds_XP_016448684.1_43312
CDS Infomation

[gene=LOC107773771] [db_xref=GeneID:107773771] [protein=aspartate aminotransferase, cytoplasmic] [protein_id=XP_016448684.1] [location=join(233601..233783,234287..234358,235456..235517,235597..235680,236318..236417,236528..236648,237761..237924,238054..238191,238787..238908,239050..239144,239991..240111,240451..240535)] [gbkey=CDS]
Sequence

ATGAACATGTCACAACAATCACCGTCCGCTGACCGGAGGTTGAGTGTTTTGGCGAGGCAC
CTTGAACCGTCGTCCTCCGCCACCGTCGAAACCTCCATCGTCGCTGCTCCTACCTCTGGA
AATGCTGGAACCAACTCTGTCTTCTCTCACATCGTTCGTGCTCCCGAAGATCCTATTCTC
GGGGTTACTATTGCATACAATAAAGATAGCAGCCCCATGAAGTTGAATTTGGGAGTTGGT
GCATATCGCACAGAGGAAGGAAAACCGCTTGTTTTGAATGTTGTAAGACAAGCAGAGCAG
CTACTAGTAAATGACAGGTCTCGCGTTAAAGAGTACCTATCTATTACTGGACTGGCAGAC
TTCAATAAATTGAGTGCTAAGCTGATACTTGGTGCCGACAGCCCTGCTATTCAAGAGAAC
AGAGTAACAACTGTGCAGTGCTTGTCTGGCACAGGCTCATTGAGGGTTGGAGCTGAATTT
TTGGCTCGACATTATCATCAACGCACTATTTATATTCCCCAACCAACATGGGGAAACCAC
CCAAAAGTTTTCACTTTAGCTGGGTTATCAGTAAAGAGTTACCGCTACTATGATCCAGCA
ACTCGTGGACTCAATTTTCAAGGTTTGTTGGAAGACCTTGGATCTGCTCCATCGGGAGCG
ATAGTGCTACTTCATGCTTGTGCCCATAACCCCACTGGTGTTGATCCAACCATTGATCAG
TGGGAGCAAATTAGGAGATTGATGAGATCAAGAGGATTGTTGCCCTTCTTTGATAGTGCA
TATCAGGGCTTTGCCAGTGGAAGCCTAGATACAGATGCACAGTCTGTTCGCATGTTTGTC
GCAGATGGAGGTGAAGTACTTGTTGCTCAAAGTTATGCAAAGAATATGGGGCTTTATGGT
GAACGTGTCGGAGCTCTAAGCATCGTCTGCAGAAATGCTGATGTGGCGAGCAGAGTTGAG
AGCCAGCTGAAGTTGGTGATTAGGCCAATGTATTCCAATCCGCCCATCCATGGTGCGTCA
ATAGTTGCCACAATCCTTAAAGACAGAAACATGTACCATGAATGGACCCTTGAGCTGAAA
GCAATGGCTGATAGAATCATCAGAATGCGTCAGCAATTATTTGATGCTTTACGTGCTAGA
GGTACACCTGGTGACTGGAGTCACATTATCAAGCAGATTGGAATGTTTACTTTCACGGGA
CTTAACTCAGAGCAAGTTGCCTTCATGACCAAAGAGTACCACATCTACATGACATCAGAT
GGACGCATCAGTATGGCAGGTCTGAGCTCCAGGACAGTTCCACATCTAGCAGATGCCATA
CATGCTGCTGTTGCTCGAGCTCGTTGA

Peptide Sequence

PEP ID

XP_016448684.1
PEP Infomation

PREDICTED: aspartate aminotransferase, cytoplasmic [Nicotiana tabacum]
Sequence

MNMSQQSPSADRRLSVLARHLEPSSSATVETSIVAAPTSGNAGTNSVFSHIVRAPEDPIL
GVTIAYNKDSSPMKLNLGVGAYRTEEGKPLVLNVVRQAEQLLVNDRSRVKEYLSITGLAD
FNKLSAKLILGADSPAIQENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH
PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPSGAIVLLHACAHNPTGVDPTIDQ
WEQIRRLMRSRGLLPFFDSAYQGFASGSLDTDAQSVRMFVADGGEVLVAQSYAKNMGLYG
ERVGALSIVCRNADVASRVESQLKLVIRPMYSNPPIHGASIVATILKDRNMYHEWTLELK
AMADRIIRMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSD
GRISMAGLSSRTVPHLADAIHAAVARAR

Transcript Sequence

Gene sequence data has not been registered.